Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 DFFBP1-201ENST00000433250 979 ntBASIC17.01■□□□□ 0.31
RFX1P22670 ACA64.2-201ENST00000459014 129 ntBASIC17.01■□□□□ 0.31
RFX1P22670 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 IGHV3-72-202ENST00000621503 303 ntBASIC17.01■□□□□ 0.31
RFX1P22670 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 AL607033.1-201ENST00000623900 1599 ntBASIC17.01■□□□□ 0.31
RFX1P22670 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.01■□□□□ 0.31
RFX1P22670 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 AC138035.3-201ENST00000622706 2791 ntBASIC17■□□□□ 0.31
RFX1P22670 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 AC009090.5-201ENST00000624886 2285 ntBASIC17■□□□□ 0.31
RFX1P22670 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17■□□□□ 0.31
RFX1P22670 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 BID-213ENST00000615414 2236 ntTSL 5 BASIC17■□□□□ 0.31
RFX1P22670 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 C18orf15-201ENST00000623680 2534 ntBASIC17■□□□□ 0.31
RFX1P22670 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
RFX1P22670 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 DGCR5-201ENST00000399539 862 ntBASIC17■□□□□ 0.31
RFX1P22670 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX1P22670 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17■□□□□ 0.31
RFX1P22670 API5-211ENST00000534695 560 ntTSL 5 BASIC17■□□□□ 0.31
RFX1P22670 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 Six3os1_5.1-201ENST00000611000 271 ntBASIC17■□□□□ 0.31
RFX1P22670 TEX28P1-201ENST00000613479 1221 ntBASIC17■□□□□ 0.31
RFX1P22670 TEX28P2-201ENST00000617764 1221 ntBASIC17■□□□□ 0.31
RFX1P22670 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17■□□□□ 0.31
RFX1P22670 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17■□□□□ 0.31
RFX1P22670 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX1P22670 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RFX1P22670 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 KRT8P44-201ENST00000441609 1350 ntBASIC17■□□□□ 0.31
RFX1P22670 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RFX1P22670 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RFX1P22670 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms