Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.43□□□□□ -0.26
CCL1P22362 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CCL1P22362 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL1P22362 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CCL1P22362 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 AC012508.2-201ENST00000567613 1472 ntBASIC13.42□□□□□ -0.26
CCL1P22362 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCL1P22362 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL1P22362 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 KRT18P43-201ENST00000469825 1281 ntBASIC13.42□□□□□ -0.26
CCL1P22362 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL1P22362 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 AC025181.2-201ENST00000606994 802 ntBASIC13.42□□□□□ -0.26
CCL1P22362 AC074044.1-201ENST00000609673 707 ntBASIC13.42□□□□□ -0.26
CCL1P22362 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL1P22362 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL1P22362 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL1P22362 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 CNN2P11-201ENST00000429351 262 ntBASIC13.41□□□□□ -0.26
CCL1P22362 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL1P22362 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.41□□□□□ -0.26
CCL1P22362 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 AL512361.1-201ENST00000554200 418 ntBASIC13.41□□□□□ -0.26
CCL1P22362 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 AC027612.4-201ENST00000605371 583 ntBASIC13.41□□□□□ -0.26
CCL1P22362 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 TEX28P1-201ENST00000613479 1221 ntBASIC13.41□□□□□ -0.26
CCL1P22362 TEX28P2-201ENST00000617764 1221 ntBASIC13.41□□□□□ -0.26
CCL1P22362 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms