Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HLA-J-204ENST00000495278 958 ntBASIC18.8■□□□□ 0.6
KCNA3P22001 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.8■□□□□ 0.6
KCNA3P22001 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 AC009779.1-201ENST00000551138 283 ntBASIC18.8■□□□□ 0.6
KCNA3P22001 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.8■□□□□ 0.6
KCNA3P22001 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNA3P22001 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KCNA3P22001 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNA3P22001 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KCNA3P22001 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNA3P22001 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNA3P22001 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 VDAC1P1-201ENST00000439229 848 ntBASIC18.79■□□□□ 0.6
KCNA3P22001 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.79■□□□□ 0.6
KCNA3P22001 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNA3P22001 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNA3P22001 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNA3P22001 AC103810.10-201ENST00000606504 343 ntBASIC18.79■□□□□ 0.6
KCNA3P22001 AC007718.1-201ENST00000621078 280 ntBASIC18.79■□□□□ 0.6
KCNA3P22001 AL603764.1-201ENST00000636452 321 ntBASIC18.79■□□□□ 0.6
KCNA3P22001 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 AP000593.2-201ENST00000542775 1433 ntBASIC18.79■□□□□ 0.6
KCNA3P22001 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNA3P22001 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNA3P22001 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNA3P22001 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNA3P22001 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KCNA3P22001 AC006449.6-201ENST00000612330 2296 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNA3P22001 OR2K2-202ENST00000374428 1038 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 AC100827.2-201ENST00000563214 1194 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNA3P22001 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.78■□□□□ 0.6
KCNA3P22001 MIR4649-201ENST00000582839 64 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 AC005357.2-202ENST00000590507 1060 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.78■□□□□ 0.6
KCNA3P22001 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.78■□□□□ 0.6
KCNA3P22001 AC242376.2-201ENST00000619355 883 ntBASIC18.78■□□□□ 0.6
KCNA3P22001 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
KCNA3P22001 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNA3P22001 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNA3P22001 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms