Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AC140113.2-201ENST00000604370 208 ntBASIC13.77□□□□□ -0.21
ATF1P18846 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AC027601.4-201ENST00000611259 610 ntBASIC13.77□□□□□ -0.21
ATF1P18846 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AC008267.7-201ENST00000624570 1194 ntBASIC13.77□□□□□ -0.21
ATF1P18846 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.76□□□□□ -0.21
ATF1P18846 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 MED15P5-201ENST00000423150 992 ntBASIC13.76□□□□□ -0.21
ATF1P18846 AL645939.2-201ENST00000427340 991 ntBASIC13.76□□□□□ -0.21
ATF1P18846 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ATF1P18846 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.76□□□□□ -0.21
ATF1P18846 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.76□□□□□ -0.21
ATF1P18846 AL135744.1-201ENST00000565098 629 ntBASIC13.76□□□□□ -0.21
ATF1P18846 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.76□□□□□ -0.21
ATF1P18846 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.76□□□□□ -0.21
ATF1P18846 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.76□□□□□ -0.21
ATF1P18846 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 REXO1L1P-202ENST00000608646 1974 ntBASIC13.76□□□□□ -0.21
ATF1P18846 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ATF1P18846 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.76□□□□□ -0.21
ATF1P18846 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ATF1P18846 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ATF1P18846 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 AC004987.2-201ENST00000395959 1148 ntBASIC13.75□□□□□ -0.21
ATF1P18846 AL355306.1-201ENST00000415580 579 ntBASIC13.75□□□□□ -0.21
ATF1P18846 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 RNA5SP410-201ENST00000516285 106 ntBASIC13.75□□□□□ -0.21
ATF1P18846 FAM86C2P-203ENST00000528684 1004 ntBASIC13.75□□□□□ -0.21
ATF1P18846 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.75□□□□□ -0.21
ATF1P18846 AC106730.1-201ENST00000566722 1090 ntBASIC13.75□□□□□ -0.21
ATF1P18846 FAM197Y3-203ENST00000618346 717 ntBASIC13.75□□□□□ -0.21
ATF1P18846 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms