Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS1P17812 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CTPS1P17812 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS1P17812 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS1P17812 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS1P17812 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 FAM86LP-201ENST00000478302 853 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.69■□□□□ 0.1
CTPS1P17812 WASH4P-201ENST00000564273 1246 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.69■□□□□ 0.1
CTPS1P17812 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS1P17812 AL662799.1-202ENST00000614205 422 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 AC087481.3-201ENST00000602886 1894 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS1P17812 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS1P17812 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CTPS1P17812 TSPY26P-202ENST00000565928 3884 ntBASIC15.69■□□□□ 0.1
CTPS1P17812 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 AL133267.1-201ENST00000398220 340 ntBASIC15.68■□□□□ 0.1
CTPS1P17812 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.68■□□□□ 0.1
CTPS1P17812 AC087499.6-201ENST00000411576 835 ntBASIC15.68■□□□□ 0.1
CTPS1P17812 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.68■□□□□ 0.1
CTPS1P17812 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.68■□□□□ 0.1
CTPS1P17812 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CTPS1P17812 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CTPS1P17812 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS1P17812 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS1P17812 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
CTPS1P17812 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms