Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.3■□□□□ 0.04
PCNAP12004 MIR4313-201ENST00000580760 101 ntBASIC15.3■□□□□ 0.04
PCNAP12004 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCNAP12004 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 RN7SL828P-201ENST00000607615 303 ntBASIC15.3■□□□□ 0.04
PCNAP12004 AC007967.4-201ENST00000614700 386 ntBASIC15.3■□□□□ 0.04
PCNAP12004 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.3■□□□□ 0.04
PCNAP12004 AC023511.2-201ENST00000618803 211 ntBASIC15.3■□□□□ 0.04
PCNAP12004 AP001059.3-201ENST00000619053 235 ntBASIC15.3■□□□□ 0.04
PCNAP12004 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.3■□□□□ 0.04
PCNAP12004 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
PCNAP12004 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
PCNAP12004 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
PCNAP12004 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCNAP12004 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCNAP12004 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
PCNAP12004 AC020658.6-201ENST00000623564 1870 ntBASIC15.29■□□□□ 0.04
PCNAP12004 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCNAP12004 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCNAP12004 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 AZGP1P1-201ENST00000411909 902 ntBASIC15.29■□□□□ 0.04
PCNAP12004 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 AC087481.3-201ENST00000602886 1894 ntBASIC15.29■□□□□ 0.04
PCNAP12004 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
PCNAP12004 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCNAP12004 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
PCNAP12004 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCNAP12004 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.29■□□□□ 0.04
PCNAP12004 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 AL109954.1-202ENST00000564051 2148 ntBASIC15.28■□□□□ 0.04
PCNAP12004 AC138035.3-201ENST00000622706 2791 ntBASIC15.28■□□□□ 0.04
PCNAP12004 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCNAP12004 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 AL035456.1-201ENST00000456064 1369 ntBASIC15.28■□□□□ 0.04
PCNAP12004 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.28■□□□□ 0.04
PCNAP12004 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCNAP12004 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.28■□□□□ 0.04
PCNAP12004 TSEN15P1-201ENST00000423257 515 ntBASIC15.28■□□□□ 0.04
PCNAP12004 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCNAP12004 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.28■□□□□ 0.04
PCNAP12004 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 SNX18-202ENST00000343017 3140 ntBASIC15.28■□□□□ 0.04
PCNAP12004 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 AC097376.2-205ENST00000610159 5334 ntBASIC15.28■□□□□ 0.04
PCNAP12004 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCNAP12004 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.28■□□□□ 0.04
PCNAP12004 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PCNAP12004 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCNAP12004 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms