Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.24□□□□□ -0.45
CD28P10747 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.24□□□□□ -0.45
CD28P10747 BCRP2-202ENST00000447763 634 ntBASIC12.24□□□□□ -0.45
CD28P10747 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CD28P10747 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 RPL13AP25-201ENST00000484130 612 ntBASIC12.24□□□□□ -0.45
CD28P10747 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.24□□□□□ -0.45
CD28P10747 BCRP6-201ENST00000510112 632 ntBASIC12.24□□□□□ -0.45
CD28P10747 BCRP7-201ENST00000511549 544 ntBASIC12.24□□□□□ -0.45
CD28P10747 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.24□□□□□ -0.45
CD28P10747 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.24□□□□□ -0.45
CD28P10747 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AC097376.2-205ENST00000610159 5334 ntBASIC12.24□□□□□ -0.45
CD28P10747 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.24□□□□□ -0.45
CD28P10747 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD28P10747 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 C1QBPP1-201ENST00000400117 770 ntBASIC12.23□□□□□ -0.45
CD28P10747 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.23□□□□□ -0.45
CD28P10747 BNIP3P42-201ENST00000454982 569 ntBASIC12.23□□□□□ -0.45
CD28P10747 CTBP2P5-201ENST00000454986 1264 ntBASIC12.23□□□□□ -0.45
CD28P10747 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.23□□□□□ -0.45
CD28P10747 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 AC120045.2-201ENST00000567334 178 ntBASIC12.23□□□□□ -0.45
CD28P10747 AC124283.3-201ENST00000570869 594 ntBASIC12.23□□□□□ -0.45
CD28P10747 BNIP3P29-201ENST00000598302 571 ntBASIC12.23□□□□□ -0.45
CD28P10747 AC097359.3-201ENST00000603982 1210 ntBASIC12.23□□□□□ -0.45
CD28P10747 AL022328.1-201ENST00000610050 478 ntBASIC12.23□□□□□ -0.45
CD28P10747 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
CD28P10747 AC011447.5-201ENST00000616168 564 ntBASIC12.23□□□□□ -0.45
CD28P10747 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD28P10747 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms