Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOA4P06727 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOA4P06727 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
APOA4P06727 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
APOA4P06727 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
APOA4P06727 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APOA4P06727 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APOA4P06727 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
APOA4P06727 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
APOA4P06727 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 AP002414.2-201ENST00000591780 3365 ntBASIC15.7■□□□□ 0.1
APOA4P06727 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 AC018892.3-201ENST00000623986 2499 ntBASIC15.7■□□□□ 0.1
APOA4P06727 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.7■□□□□ 0.1
APOA4P06727 SPDYE17-201ENST00000412399 783 ntBASIC15.7■□□□□ 0.1
APOA4P06727 AC107890.1-201ENST00000422478 521 ntBASIC15.7■□□□□ 0.1
APOA4P06727 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
APOA4P06727 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA4P06727 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.7■□□□□ 0.1
APOA4P06727 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.7■□□□□ 0.1
APOA4P06727 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.7■□□□□ 0.1
APOA4P06727 AL079307.3-201ENST00000556114 283 ntBASIC15.7■□□□□ 0.1
APOA4P06727 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA4P06727 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.7■□□□□ 0.1
APOA4P06727 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.7■□□□□ 0.1
APOA4P06727 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA4P06727 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA4P06727 AL161772.1-201ENST00000610494 4412 ntBASIC15.69■□□□□ 0.1
APOA4P06727 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA4P06727 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA4P06727 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.69■□□□□ 0.1
APOA4P06727 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA4P06727 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 AC007292.2-201ENST00000593524 1812 ntBASIC15.69■□□□□ 0.1
APOA4P06727 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
APOA4P06727 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 PHKG1P2-201ENST00000457537 863 ntBASIC15.69■□□□□ 0.1
APOA4P06727 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 AC069120.2-201ENST00000524091 540 ntBASIC15.69■□□□□ 0.1
APOA4P06727 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.69■□□□□ 0.1
APOA4P06727 AC140878.1-201ENST00000565277 250 ntBASIC15.69■□□□□ 0.1
APOA4P06727 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.69■□□□□ 0.1
APOA4P06727 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.69■□□□□ 0.1
APOA4P06727 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA4P06727 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 LINC02228-204ENST00000642115 2962 ntBASIC15.69■□□□□ 0.1
APOA4P06727 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 KRT8P12-202ENST00000472924 1397 ntBASIC15.69■□□□□ 0.1
APOA4P06727 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA4P06727 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
APOA4P06727 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 AC009090.5-201ENST00000624886 2285 ntBASIC15.69■□□□□ 0.1
APOA4P06727 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA4P06727 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.68■□□□□ 0.1
APOA4P06727 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APOA4P06727 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA4P06727 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA4P06727 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms