Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 INTS4P1-203ENST00000641008 3683 ntBASIC13.16□□□□□ -0.3
CD74P04233 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 MBLAC2-202ENST00000514906 1936 ntBASIC13.16□□□□□ -0.3
CD74P04233 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 IGLL3P-201ENST00000412472 434 ntBASIC13.16□□□□□ -0.3
CD74P04233 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.16□□□□□ -0.3
CD74P04233 MIR4751-201ENST00000578027 74 ntBASIC13.16□□□□□ -0.3
CD74P04233 SPTSSB-204ENST00000617024 1292 ntBASIC13.16□□□□□ -0.3
CD74P04233 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CD74P04233 AL358472.4-201ENST00000633140 710 ntBASIC13.16□□□□□ -0.3
CD74P04233 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 OR2I1P-209ENST00000641730 5365 ntBASIC13.16□□□□□ -0.3
CD74P04233 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 AL359881.3-201ENST00000602640 1721 ntBASIC13.16□□□□□ -0.3
CD74P04233 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.16□□□□□ -0.3
CD74P04233 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.15□□□□□ -0.3
CD74P04233 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 AP000845.1-201ENST00000581677 2131 ntBASIC13.15□□□□□ -0.3
CD74P04233 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD74P04233 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CD74P04233 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.15□□□□□ -0.3
CD74P04233 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.15□□□□□ -0.3
CD74P04233 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.15□□□□□ -0.3
CD74P04233 RNPS1P1-201ENST00000507437 918 ntBASIC13.15□□□□□ -0.3
CD74P04233 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.15□□□□□ -0.3
CD74P04233 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 AC012640.2-201ENST00000561606 901 ntBASIC13.15□□□□□ -0.3
CD74P04233 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.15□□□□□ -0.3
CD74P04233 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CD74P04233 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.15□□□□□ -0.3
CD74P04233 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CD74P04233 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 AC152010.1-201ENST00000415779 2006 ntBASIC13.15□□□□□ -0.3
CD74P04233 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD74P04233 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
CD74P04233 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 AC015802.1-201ENST00000588104 1449 ntBASIC13.14□□□□□ -0.31
CD74P04233 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 AP001267.2-201ENST00000532619 2086 ntBASIC13.14□□□□□ -0.31
CD74P04233 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 AL161772.1-201ENST00000610494 4412 ntBASIC13.14□□□□□ -0.31
CD74P04233 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.14□□□□□ -0.31
CD74P04233 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.14□□□□□ -0.31
CD74P04233 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms