Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Z97205.2-201ENST00000564697 1639 ntBASIC14.69□□□□□ -0.06
PDGFAP04085 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 CICP14-201ENST00000629111 2732 ntBASIC14.69□□□□□ -0.06
PDGFAP04085 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 AL133338.1-201ENST00000565695 1517 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 PCGF3-213ENST00000620529 1899 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 MIR5189-201ENST00000577370 114 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.68□□□□□ -0.06
PDGFAP04085 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 MIR4321-201ENST00000592276 80 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 MIR6787-201ENST00000616675 61 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 AC138035.3-201ENST00000622706 2791 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 AL365203.3-201ENST00000609742 2057 ntBASIC14.68□□□□□ -0.06
PDGFAP04085 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFAP04085 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFAP04085 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFAP04085 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
PDGFAP04085 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFAP04085 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFAP04085 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFAP04085 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 MIR6869-201ENST00000619434 62 ntBASIC14.67□□□□□ -0.06
PDGFAP04085 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.67□□□□□ -0.06
PDGFAP04085 CU634019.7-201ENST00000624153 1185 ntBASIC14.67□□□□□ -0.06
PDGFAP04085 FP236241.2-201ENST00000624906 1185 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms