Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.77□□□□□ -0.04
SNX4O95219 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SNX4O95219 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.77□□□□□ -0.05
SNX4O95219 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 AC241585.1-201ENST00000433527 519 ntBASIC14.77□□□□□ -0.05
SNX4O95219 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.77□□□□□ -0.05
SNX4O95219 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.77□□□□□ -0.05
SNX4O95219 AC093214.1-201ENST00000511688 1107 ntBASIC14.77□□□□□ -0.05
SNX4O95219 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.77□□□□□ -0.05
SNX4O95219 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SNX4O95219 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 SBF1P1-201ENST00000444527 5631 ntBASIC14.77□□□□□ -0.05
SNX4O95219 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.77□□□□□ -0.05
SNX4O95219 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.77□□□□□ -0.05
SNX4O95219 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNX4O95219 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
SNX4O95219 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 AC112504.1-201ENST00000623415 1841 ntBASIC14.76□□□□□ -0.05
SNX4O95219 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.76□□□□□ -0.05
SNX4O95219 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 AL512638.1-201ENST00000457493 794 ntBASIC14.76□□□□□ -0.05
SNX4O95219 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 BANF1P1-201ENST00000553684 263 ntBASIC14.76□□□□□ -0.05
SNX4O95219 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.76□□□□□ -0.05
SNX4O95219 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.76□□□□□ -0.05
SNX4O95219 AL390955.2-201ENST00000603032 514 ntBASIC14.76□□□□□ -0.05
SNX4O95219 AL133215.2-201ENST00000609242 977 ntBASIC14.76□□□□□ -0.05
SNX4O95219 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX4O95219 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX4O95219 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX4O95219 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.75□□□□□ -0.05
SNX4O95219 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SNX4O95219 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX4O95219 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms