Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLDN11O75508 GIMAP3P-201ENST00000495150 836 ntBASIC15.88■□□□□ 0.13
CLDN11O75508 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN11O75508 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.88■□□□□ 0.13
CLDN11O75508 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN11O75508 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
CLDN11O75508 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN11O75508 AC010319.3-201ENST00000597028 470 ntBASIC15.88■□□□□ 0.13
CLDN11O75508 AC239800.4-201ENST00000603712 296 ntBASIC15.88■□□□□ 0.13
CLDN11O75508 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.88■□□□□ 0.13
CLDN11O75508 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN11O75508 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CLDN11O75508 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 PAUPAR-201ENST00000630360 2965 ntBASIC15.88■□□□□ 0.13
CLDN11O75508 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN11O75508 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN11O75508 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN11O75508 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN11O75508 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN11O75508 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
CLDN11O75508 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN11O75508 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN11O75508 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 ACTG1P3-201ENST00000431775 1114 ntBASIC15.87■□□□□ 0.13
CLDN11O75508 TTTY23B-201ENST00000442790 549 ntBASIC15.87■□□□□ 0.13
CLDN11O75508 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN11O75508 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.87■□□□□ 0.13
CLDN11O75508 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN11O75508 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN11O75508 AP001063.1-201ENST00000568332 529 ntBASIC15.87■□□□□ 0.13
CLDN11O75508 AC009486.1-201ENST00000569860 813 ntBASIC15.87■□□□□ 0.13
CLDN11O75508 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 AC015936.2-201ENST00000593177 259 ntBASIC15.87■□□□□ 0.13
CLDN11O75508 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN11O75508 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CLDN11O75508 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN11O75508 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN11O75508 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN11O75508 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN11O75508 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN11O75508 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN11O75508 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN11O75508 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms