Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 AC091951.1-201ENST00000512854 2465 ntBASIC14.29□□□□□ -0.12
RNF13O43567 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF13O43567 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF13O43567 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF13O43567 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 PHKG1P2-201ENST00000457537 863 ntBASIC14.28□□□□□ -0.12
RNF13O43567 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 SNHG9-202ENST00000564014 471 ntBASIC14.28□□□□□ -0.12
RNF13O43567 AC026150.2-201ENST00000564693 1156 ntBASIC14.28□□□□□ -0.12
RNF13O43567 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 AC009093.7-201ENST00000623853 1223 ntBASIC14.28□□□□□ -0.12
RNF13O43567 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 AC026748.1-201ENST00000624349 3251 ntBASIC14.28□□□□□ -0.12
RNF13O43567 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF13O43567 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF13O43567 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF13O43567 C18orf15-201ENST00000623680 2534 ntBASIC14.28□□□□□ -0.12
RNF13O43567 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RNF13O43567 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RNF13O43567 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF13O43567 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.12
RNF13O43567 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.27□□□□□ -0.12
RNF13O43567 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.27□□□□□ -0.12
RNF13O43567 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF13O43567 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RNF13O43567 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF13O43567 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF13O43567 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF13O43567 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF13O43567 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF13O43567 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.27□□□□□ -0.13
RNF13O43567 AC254562.1-201ENST00000417586 456 ntBASIC14.27□□□□□ -0.13
RNF13O43567 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF13O43567 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.27□□□□□ -0.13
RNF13O43567 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF13O43567 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF13O43567 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms