Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLOCKO15516 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 AC117489.1-201ENST00000625169 3217 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.93□□□□□ -0.02
CLOCKO15516 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CLOCKO15516 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 PMS2P4-201ENST00000412466 1052 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.93□□□□□ -0.02
CLOCKO15516 AC004967.1-201ENST00000453589 447 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 MIR3909-201ENST00000579518 119 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 AL031055.1-201ENST00000606362 631 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.93□□□□□ -0.02
CLOCKO15516 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.93□□□□□ -0.02
CLOCKO15516 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLOCKO15516 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.92□□□□□ -0.02
CLOCKO15516 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.92□□□□□ -0.02
CLOCKO15516 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 ACTL9-202ENST00000612068 1252 ntBASIC14.92□□□□□ -0.02
CLOCKO15516 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 AC134684.3-201ENST00000641758 218 ntBASIC14.92□□□□□ -0.02
CLOCKO15516 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 AC126335.2-201ENST00000623362 4637 ntBASIC14.92□□□□□ -0.02
CLOCKO15516 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CLOCKO15516 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLOCKO15516 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.92□□□□□ -0.02
CLOCKO15516 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 AJ011931.1-201ENST00000618749 2492 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms