Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
NDUFA1O15239 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.74□□□□□ -0.69
NDUFA1O15239 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.74□□□□□ -0.69
NDUFA1O15239 UNC93B7-201ENST00000509439 705 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 UNC93B6-202ENST00000528242 690 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 AC109635.5-201ENST00000533593 962 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC10.74□□□□□ -0.69
NDUFA1O15239 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.74□□□□□ -0.69
NDUFA1O15239 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 AC127383.1-201ENST00000444697 1800 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 AC134407.2-201ENST00000625089 1978 ntBASIC10.74□□□□□ -0.69
NDUFA1O15239 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NDUFA1O15239 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NDUFA1O15239 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NDUFA1O15239 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
NDUFA1O15239 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC006504.5-208ENST00000588784 2401 ntBASIC10.73□□□□□ -0.69
NDUFA1O15239 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.73□□□□□ -0.69
NDUFA1O15239 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AL031284.1-201ENST00000419297 478 ntBASIC10.73□□□□□ -0.69
NDUFA1O15239 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC098831.1-202ENST00000438821 336 ntBASIC10.73□□□□□ -0.69
NDUFA1O15239 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.73□□□□□ -0.69
NDUFA1O15239 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.73□□□□□ -0.69
NDUFA1O15239 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.73□□□□□ -0.69
NDUFA1O15239 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms