Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.56■□□□□ 0.24
CAPN9O14815 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.56■□□□□ 0.24
CAPN9O14815 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN9O14815 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.56■□□□□ 0.24
CAPN9O14815 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 TIMM17BP1-201ENST00000545713 516 ntBASIC16.56■□□□□ 0.24
CAPN9O14815 MIR4313-201ENST00000580760 101 ntBASIC16.56■□□□□ 0.24
CAPN9O14815 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CAPN9O14815 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 AC097359.3-201ENST00000603982 1210 ntBASIC16.56■□□□□ 0.24
CAPN9O14815 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.56■□□□□ 0.24
CAPN9O14815 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN9O14815 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 AL161772.1-201ENST00000610494 4412 ntBASIC16.56■□□□□ 0.24
CAPN9O14815 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CAPN9O14815 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN9O14815 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN9O14815 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN9O14815 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 MRPS18AP1-201ENST00000414458 589 ntBASIC16.55■□□□□ 0.24
CAPN9O14815 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.55■□□□□ 0.24
CAPN9O14815 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.55■□□□□ 0.24
CAPN9O14815 AC008738.7-201ENST00000609744 511 ntBASIC16.55■□□□□ 0.24
CAPN9O14815 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.55■□□□□ 0.24
CAPN9O14815 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CAPN9O14815 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN9O14815 AP002414.2-201ENST00000591780 3365 ntBASIC16.55■□□□□ 0.24
CAPN9O14815 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN9O14815 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.55■□□□□ 0.24
CAPN9O14815 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN9O14815 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN9O14815 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN9O14815 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CAPN9O14815 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms