Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX39AO00148 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 HILS1-202ENST00000545329 423 ntBASIC17.54■□□□□ 0.4
DDX39AO00148 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX39AO00148 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
DDX39AO00148 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.54■□□□□ 0.4
DDX39AO00148 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX39AO00148 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX39AO00148 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX39AO00148 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX39AO00148 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 SOCS2P1-201ENST00000417727 557 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX39AO00148 AL162726.2-201ENST00000438986 1017 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 RPL13AP25-201ENST00000484130 612 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 AC008735.3-201ENST00000596646 500 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 AC107373.2-201ENST00000607735 490 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX39AO00148 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX39AO00148 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX39AO00148 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.53■□□□□ 0.4
DDX39AO00148 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX39AO00148 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DDX39AO00148 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DDX39AO00148 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.52■□□□□ 0.4
DDX39AO00148 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.52■□□□□ 0.4
DDX39AO00148 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX39AO00148 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.52■□□□□ 0.4
DDX39AO00148 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.52■□□□□ 0.4
DDX39AO00148 AC007389.4-201ENST00000454674 793 ntBASIC17.52■□□□□ 0.4
DDX39AO00148 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DDX39AO00148 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.52■□□□□ 0.4
DDX39AO00148 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.52■□□□□ 0.4
DDX39AO00148 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DDX39AO00148 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX39AO00148 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX39AO00148 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DDX39AO00148 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.52■□□□□ 0.39
DDX39AO00148 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.52■□□□□ 0.39
DDX39AO00148 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.52■□□□□ 0.39
DDX39AO00148 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.52■□□□□ 0.39
DDX39AO00148 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms