Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 GNAQP1-201ENST00000444815 1067 ntBASIC14.18□□□□□ -0.14
LINC01387J3KSC0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 LINC02084-201ENST00000606069 1096 ntBASIC14.18□□□□□ -0.14
LINC01387J3KSC0 AL662799.1-202ENST00000614205 422 ntBASIC14.18□□□□□ -0.14
LINC01387J3KSC0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01387J3KSC0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC104640.1-201ENST00000562617 2109 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 API5-211ENST00000534695 560 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC023310.3-201ENST00000557027 670 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC100756.1-201ENST00000562736 682 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC138749.3-201ENST00000567691 622 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC116165.1-201ENST00000611806 668 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AF228730.6-201ENST00000641497 218 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC084121.3-201ENST00000641716 218 ntBASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01387J3KSC0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AC018892.3-201ENST00000623986 2499 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AC098614.1-201ENST00000368528 745 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 RN7SL399P-201ENST00000471648 279 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AC000095.1-201ENST00000603208 874 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 TMEM261P1-201ENST00000604899 340 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AL391069.4-201ENST00000609583 481 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01387J3KSC0 AL158212.4-201ENST00000624062 1286 ntBASIC14.16□□□□□ -0.14
LINC01387J3KSC0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms