Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TSN-212ENST00000536142 3328 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 LSS-211ENST00000522411 2523 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 KRT18P65-201ENST00000439811 1286 ntBASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AC142381.2-201ENST00000566120 298 ntBASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 FRMD8P1-201ENST00000440433 1524 ntBASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AL365181.3-201ENST00000605886 3222 ntBASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHKB-CPT1BH3BT56 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FGD5P1-202ENST00000614866 2498 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 AL021920.2-201ENST00000624828 1351 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TBC1D3P2-202ENST00000577902 1649 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CELP-203ENST00000624767 2414 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms