Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 AC092902.6-201ENST00000641783 218 ntBASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM49D1C9J1S8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 IL9RP2-201ENST00000423948 1312 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 CICP11-201ENST00000434745 2827 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 FAM58CP-201ENST00000435741 640 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 KRT126P-201ENST00000549467 1181 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 LINC01225-203ENST00000563550 1244 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 AC097376.2-205ENST00000610159 5334 ntBASIC15.69■□□□□ 0.1
TRIM49D1C9J1S8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 AC139749.1-202ENST00000617529 3139 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 WASH3P-207ENST00000560956 1394 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 FO538757.1-201ENST00000623083 1397 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SPDYE11-202ENST00000450699 704 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SPDYE9P-201ENST00000570642 692 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SPDYE10P-202ENST00000612005 668 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 SPDYE8P-202ENST00000612377 668 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 CICP14-201ENST00000629111 2732 ntBASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM49D1C9J1S8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms