Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 RHOQP1-201ENST00000555758 579 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AP006547.1-201ENST00000563435 692 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC104982.3-201ENST00000581995 514 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AL354989.2-201ENST00000435838 1540 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 TPM3P8-201ENST00000330554 643 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 KLF2P2-201ENST00000416807 1039 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 RPSAP36-202ENST00000494591 1261 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 RN7SL48P-201ENST00000579283 293 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC106872.11-201ENST00000605838 421 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AC138028.6-201ENST00000616106 1482 ntBASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC187A0A096LP49 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 PKD1P5-201ENST00000532415 10291 ntBASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 RNU1-114P-201ENST00000365297 166 ntBASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 AC020914.3-201ENST00000594712 304 ntBASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms