Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 AL360270.3-201ENST00000609118 1348 ntBASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 C2orf69P2-201ENST00000562032 1123 ntBASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 MST1L-201ENST00000442552 2185 ntBASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SYNPO2Q9UMS6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 FAM86MP-201ENST00000340703 885 ntBASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 AL590640.2-201ENST00000457038 527 ntBASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 MIR6869-201ENST00000619434 62 ntBASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPO2Q9UMS6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPO2Q9UMS6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 POM121L8P-201ENST00000417732 1281 ntBASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 POM121L9P-203ENST00000441984 1285 ntBASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 RN7SL560P-201ENST00000577943 264 ntBASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms