Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 GK-202ENST00000378941 458 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 USP32P1-208ENST00000506594 1164 ntBASIC16.44■□□□□ 0.22
CDH9Q9ULB4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 PTP4A1P2-201ENST00000546033 454 ntBASIC16.44■□□□□ 0.22
CDH9Q9ULB4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH9Q9ULB4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ACKR1-201ENST00000368121 1240 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 GPR53P-205ENST00000457298 1084 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 AP001582.1-201ENST00000525856 295 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 SLC25A47P1-201ENST00000531577 414 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 BTNL10-201ENST00000595971 695 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 AC092850.2-201ENST00000623821 2697 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 AC090616.6-203ENST00000579186 1945 ntBASIC16.43■□□□□ 0.22
CDH9Q9ULB4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH9Q9ULB4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH9Q9ULB4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms