Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 KRT8P44-201ENST00000441609 1350 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 MIR1202-201ENST00000408529 83 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 FAM86HP-204ENST00000513466 959 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 ZNF767P-206ENST00000513792 565 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 ECM1P1-201ENST00000604092 1279 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 AC132938.4-201ENST00000623835 848 ntBASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FBXO28Q9NVF7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 MIR326-201ENST00000362220 95 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AC099548.2-209ENST00000480264 625 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 RNA5SP486-201ENST00000515961 83 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 MIR4741-201ENST00000579822 90 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 PRSS30P-206ENST00000641773 873 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 AC007787.1-201ENST00000588095 1583 ntBASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FBXO28Q9NVF7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 GOLGA2P4-201ENST00000441462 777 ntBASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.8■□□□□ 0.44
FBXO28Q9NVF7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms