Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC004835.2-201ENST00000603762 682 ntBASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 AL589702.1-201ENST00000641229 1509 ntBASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCM2LQ9NUG4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AC018892.3-201ENST00000623986 2499 ntBASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 ACTG1P14-201ENST00000446382 1122 ntBASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AC005840.4-201ENST00000541242 2494 ntBASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 AC041040.2-201ENST00000622926 2899 ntBASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.94□□□□□ -0.02
CCM2LQ9NUG4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 MRPL20P1-201ENST00000400819 433 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 IGLL3P-201ENST00000412472 434 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 FAM185BP-201ENST00000443595 716 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 KRT19P2-202ENST00000557173 1012 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 AC025678.2-201ENST00000562061 970 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms