Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CISHQ9NSE2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC138035.3-201ENST00000622706 2791 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 RN7SL399P-201ENST00000471648 279 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 RRP7BP-205ENST00000566851 833 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC092364.2-202ENST00000597012 1073 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC025181.2-201ENST00000606994 802 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC099568.2-201ENST00000609194 695 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CISHQ9NSE2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 AC104640.1-201ENST00000562617 2109 ntBASIC16.63■□□□□ 0.25
CISHQ9NSE2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CISHQ9NSE2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 FAM86LP-201ENST00000478302 853 ntBASIC16.62■□□□□ 0.25
CISHQ9NSE2 TERF1P3-201ENST00000505638 1227 ntBASIC16.62■□□□□ 0.25
CISHQ9NSE2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 AL109954.1-202ENST00000564051 2148 ntBASIC16.62■□□□□ 0.25
CISHQ9NSE2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 KRT8P44-201ENST00000441609 1350 ntBASIC16.62■□□□□ 0.25
CISHQ9NSE2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.62■□□□□ 0.25
CISHQ9NSE2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CISHQ9NSE2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CISHQ9NSE2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CISHQ9NSE2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms