Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AC104640.1-201ENST00000562617 2109 ntBASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 KRT18P43-201ENST00000469825 1281 ntBASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 AC084364.1-201ENST00000551967 1556 ntBASIC14.39□□□□□ -0.11
UBQLN4Q9NRR5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 FAM8A3P-201ENST00000427218 844 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC008738.7-201ENST00000609744 511 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC013268.4-201ENST00000637413 2228 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 AC112693.3-201ENST00000624819 1983 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 C18orf15-201ENST00000623680 2534 ntBASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBQLN4Q9NRR5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms