Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
SDHAF3Q9NRP4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC138969.3-201ENST00000546612 1459 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC138932.2-201ENST00000548268 1459 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC126755.4-201ENST00000549796 1459 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 MYO15B-237ENST00000642007 4893 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 TOMM22P5-201ENST00000416399 439 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 MEIS3P1-201ENST00000495167 958 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC092364.2-202ENST00000597012 1073 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AC097376.2-205ENST00000610159 5334 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 LINC02228-204ENST00000642115 2962 ntBASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.4□□□□□ -0.1
SDHAF3Q9NRP4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 RPL13P2-201ENST00000440687 659 ntBASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.39□□□□□ -0.11
SDHAF3Q9NRP4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms