Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 CHMP4BP1-201ENST00000556017 588 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 AL096828.3-201ENST00000615354 462 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 AC092127.1-201ENST00000567093 3455 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 HCG11-201ENST00000411553 5696 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 AC105250.1-201ENST00000509378 2057 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 AC009090.5-201ENST00000624886 2285 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 CICP13-201ENST00000422015 2789 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AP001582.1-201ENST00000525856 295 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 MIR3619-201ENST00000579667 83 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC093813.1-201ENST00000605066 256 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC107373.2-201ENST00000607735 490 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 U62317.3-201ENST00000608319 855 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC138627.1-207ENST00000641560 1006 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC018735.1-201ENST00000437208 1502 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 AC015818.8-201ENST00000587907 1519 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 OR6D1P-202ENST00000641007 5290 ntBASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM7Q9NR12 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms