Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 SOCS2P1-201ENST00000417727 557 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 RPL13AP25-201ENST00000484130 612 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 SLED1-202ENST00000512051 380 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AC124283.3-201ENST00000570869 594 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 MIR4525-201ENST00000580000 75 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AP001282.1-201ENST00000531301 1499 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.1
TM9SF3Q9HD45 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TM9SF3Q9HD45 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TM9SF3Q9HD45 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AL603832.2-201ENST00000566195 2125 ntBASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 PHKG1P2-201ENST00000457537 863 ntBASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 PTP4A1P2-201ENST00000546033 454 ntBASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AL049840.4-201ENST00000602422 811 ntBASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF3Q9HD45 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 AC023824.1-201ENST00000562945 2975 ntBASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 AC092384.3-202ENST00000564646 2873 ntBASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF3Q9HD45 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms