Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RN7SKP175-201ENST00000408472 289 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AP000358.1-201ENST00000456260 156 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AC120498.5-201ENST00000561757 299 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AP001184.1-201ENST00000637936 376 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 TREHP1-201ENST00000531328 465 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AC097359.3-201ENST00000603982 1210 ntBASIC14.17□□□□□ -0.14
CHD8Q9HCK8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CHD8Q9HCK8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 PGAM1P12-201ENST00000505622 748 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 AC090820.1-201ENST00000519722 591 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 NAV1-210ENST00000593583 726 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 KRT18P9-201ENST00000604826 1300 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 AC106047.2-201ENST00000511723 743 ntBASIC14.16□□□□□ -0.14
CHD8Q9HCK8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHD8Q9HCK8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 PUDPP3-201ENST00000445368 636 ntBASIC14.15□□□□□ -0.14
CHD8Q9HCK8 KLF2P1-201ENST00000447438 1042 ntBASIC14.15□□□□□ -0.14
CHD8Q9HCK8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 DUX4L46-201ENST00000566845 751 ntBASIC14.15□□□□□ -0.14
CHD8Q9HCK8 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms