Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 AC013726.1-201ENST00000563747 2285 ntBASIC16.17■□□□□ 0.18
PCDH9Q9HC56 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH9Q9HC56 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SPDYE17-201ENST00000412399 783 ntBASIC16.16■□□□□ 0.18
PCDH9Q9HC56 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 AC106028.4-201ENST00000614509 607 ntBASIC16.16■□□□□ 0.18
PCDH9Q9HC56 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH9Q9HC56 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.15■□□□□ 0.18
PCDH9Q9HC56 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 RPL5P21-201ENST00000404620 815 ntBASIC16.15■□□□□ 0.18
PCDH9Q9HC56 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 LINC00528-201ENST00000600723 2160 ntBASIC16.15■□□□□ 0.18
PCDH9Q9HC56 SPDYE12P-201ENST00000618416 771 ntBASIC16.15■□□□□ 0.18
PCDH9Q9HC56 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH9Q9HC56 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
PCDH9Q9HC56 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH9Q9HC56 KRT8P12-202ENST00000472924 1397 ntBASIC16.14■□□□□ 0.17
PCDH9Q9HC56 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms