Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 AL133267.1-201ENST00000398220 340 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 AC079776.1-201ENST00000401540 1152 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 AC112492.5-201ENST00000421897 457 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 FAM86LP-201ENST00000478302 853 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 MIR8072-201ENST00000614241 80 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 TSPY26P-202ENST00000565928 3884 ntBASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0A4Q9HBG4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AC015910.1-201ENST00000579400 975 ntBASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 AC000095.1-201ENST00000603208 874 ntBASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 WFDC1-204ENST00000613603 549 ntBASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 PRAL-201ENST00000624952 3286 ntBASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A4Q9HBG4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 MIR6805-201ENST00000615055 62 ntBASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A4Q9HBG4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms