Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 BX539320.1-201ENST00000623759 877 ntBASIC16.78■□□□□ 0.28
NXF3Q9H4D5 AL033527.4-201ENST00000641026 673 ntBASIC16.78■□□□□ 0.28
NXF3Q9H4D5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 AC092850.2-201ENST00000623821 2697 ntBASIC16.77■□□□□ 0.28
NXF3Q9H4D5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.77■□□□□ 0.28
NXF3Q9H4D5 RPL7P3-201ENST00000441388 714 ntBASIC16.77■□□□□ 0.28
NXF3Q9H4D5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 KRT90P-201ENST00000549264 1064 ntBASIC16.77■□□□□ 0.28
NXF3Q9H4D5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 AP005019.2-201ENST00000615104 511 ntBASIC16.77■□□□□ 0.28
NXF3Q9H4D5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NXF3Q9H4D5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.77■□□□□ 0.27
NXF3Q9H4D5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 RNU1-114P-201ENST00000365297 166 ntBASIC16.76■□□□□ 0.27
NXF3Q9H4D5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AC016694.1-201ENST00000434179 700 ntBASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AP000812.2-201ENST00000538934 718 ntBASIC16.76■□□□□ 0.27
NXF3Q9H4D5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NXF3Q9H4D5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC008894.3-201ENST00000624324 3103 ntBASIC16.75■□□□□ 0.27
NXF3Q9H4D5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.75■□□□□ 0.27
NXF3Q9H4D5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms