Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 WASH3P-207ENST00000560956 1394 ntBASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 SPCS2P1-201ENST00000561636 679 ntBASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 AC004790.1-201ENST00000612686 536 ntBASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.44■□□□□ 0.38
CCSER1Q9C0I3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AL512638.1-201ENST00000457493 794 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AC093214.1-201ENST00000511688 1107 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AL096865.1-201ENST00000606796 927 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCSER1Q9C0I3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms