Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PTPN18Q99952 GHSR-202ENST00000427970 912 ntBASIC17.6■□□□□ 0.41
PTPN18Q99952 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 MESTP3-201ENST00000503460 968 ntBASIC17.6■□□□□ 0.41
PTPN18Q99952 IGLV3-15-201ENST00000518356 244 ntBASIC17.6■□□□□ 0.41
PTPN18Q99952 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN18Q99952 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN18Q99952 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN18Q99952 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 AL358472.3-201ENST00000608147 415 ntBASIC17.6■□□□□ 0.41
PTPN18Q99952 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN18Q99952 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN18Q99952 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN18Q99952 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN18Q99952 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PTPN18Q99952 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN18Q99952 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN18Q99952 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 NOC2LP1-201ENST00000450578 752 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 AL353637.1-201ENST00000451571 732 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN18Q99952 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 AC135983.4-201ENST00000564116 1262 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 SNORD3B-2-202ENST00000571722 791 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 AC009955.4-201ENST00000597192 544 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 AC087045.2-201ENST00000606279 1003 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 COX6A1P2-201ENST00000620597 330 ntBASIC17.59■□□□□ 0.41
PTPN18Q99952 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN18Q99952 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN18Q99952 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PTPN18Q99952 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN18Q99952 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN18Q99952 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.58■□□□□ 0.41
PTPN18Q99952 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN18Q99952 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN18Q99952 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPN18Q99952 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN18Q99952 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 RPSAP31-201ENST00000416648 895 ntBASIC17.58■□□□□ 0.4
PTPN18Q99952 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.58■□□□□ 0.4
PTPN18Q99952 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PTPN18Q99952 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN18Q99952 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PTPN18Q99952 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
PTPN18Q99952 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 AC055811.4-201ENST00000624039 1754 ntBASIC17.58■□□□□ 0.4
PTPN18Q99952 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN18Q99952 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN18Q99952 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms