Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC20.15■□□□□ 0.82
ABCA3Q99758 MRPL22P1-201ENST00000505398 616 ntBASIC20.15■□□□□ 0.82
ABCA3Q99758 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.15■□□□□ 0.82
ABCA3Q99758 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ABCA3Q99758 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ABCA3Q99758 AC090502.4-201ENST00000551714 1386 ntBASIC20.14■□□□□ 0.82
ABCA3Q99758 LINC02447-202ENST00000501888 2146 ntBASIC20.14■□□□□ 0.82
ABCA3Q99758 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ABCA3Q99758 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 RN7SL81P-201ENST00000493781 261 ntBASIC20.14■□□□□ 0.81
ABCA3Q99758 SCARNA21-201ENST00000517026 139 ntBASIC20.14■□□□□ 0.81
ABCA3Q99758 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.14■□□□□ 0.81
ABCA3Q99758 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.14■□□□□ 0.81
ABCA3Q99758 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ABCA3Q99758 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ABCA3Q99758 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ABCA3Q99758 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.14■□□□□ 0.81
ABCA3Q99758 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ABCA3Q99758 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ABCA3Q99758 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ABCA3Q99758 AC099398.1-201ENST00000567919 2776 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC018463.1-201ENST00000456674 917 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 ALG3P1-201ENST00000508806 1114 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC027237.1-201ENST00000560942 655 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ABCA3Q99758 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC015909.3-201ENST00000572855 1794 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 AL627231.1-201ENST00000394467 1125 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.13■□□□□ 0.81
ABCA3Q99758 RPL7P35-201ENST00000446943 740 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.13■□□□□ 0.81
ABCA3Q99758 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 MIR6720-201ENST00000611664 98 ntBASIC20.13■□□□□ 0.81
ABCA3Q99758 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ABCA3Q99758 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ABCA3Q99758 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ABCA3Q99758 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.12■□□□□ 0.81
ABCA3Q99758 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ABCA3Q99758 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.12■□□□□ 0.81
ABCA3Q99758 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.12■□□□□ 0.81
ABCA3Q99758 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ABCA3Q99758 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.12■□□□□ 0.81
ABCA3Q99758 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ABCA3Q99758 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms