Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 AC112504.1-201ENST00000623415 1841 ntBASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 AC104457.1-201ENST00000401024 814 ntBASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.82■□□□□ 0.6
CRAMP1Q96RY5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 HLA-K-203ENST00000430151 1046 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC005740.2-201ENST00000511085 419 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 MIR4706-201ENST00000582134 82 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC100757.4-201ENST00000626934 759 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AC127383.1-201ENST00000444697 1800 ntBASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRAMP1Q96RY5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 AC004466.1-201ENST00000599515 1080 ntBASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 BNIP3P13-201ENST00000599968 566 ntBASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 AC055811.4-201ENST00000624039 1754 ntBASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRAMP1Q96RY5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 AC091046.1-201ENST00000331871 207 ntBASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 RPL5P21-201ENST00000404620 815 ntBASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 TMEM198B-204ENST00000484016 896 ntBASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRAMP1Q96RY5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms