Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AC022137.2-201ENST00000503482 481 ntBASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AP000812.2-201ENST00000538934 718 ntBASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 KRT90P-201ENST00000549264 1064 ntBASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 AC020916.1-201ENST00000587762 1774 ntBASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 AC025181.2-201ENST00000606994 802 ntBASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC85AQ96PX6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 CYP2T1P-202ENST00000641596 2535 ntBASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 ACTBP11-201ENST00000436287 1126 ntBASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC85AQ96PX6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC85AQ96PX6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms