Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 U82695.1-201ENST00000635752 1889 ntBASIC18.28■□□□□ 0.52
TRIM47Q96LD4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.27■□□□□ 0.52
TRIM47Q96LD4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AC079316.1-201ENST00000548397 411 ntBASIC18.27■□□□□ 0.52
TRIM47Q96LD4 RN7SL560P-201ENST00000577943 264 ntBASIC18.27■□□□□ 0.52
TRIM47Q96LD4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AC244669.2-201ENST00000612320 853 ntBASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM47Q96LD4 AL162727.3-201ENST00000635661 2787 ntBASIC18.27■□□□□ 0.51
TRIM47Q96LD4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM47Q96LD4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM47Q96LD4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM47Q96LD4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.27■□□□□ 0.51
TRIM47Q96LD4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.27■□□□□ 0.51
TRIM47Q96LD4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 MSTO2P-201ENST00000314835 1709 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC074338.1-201ENST00000416825 156 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC134915.1-201ENST00000426461 574 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC006033.1-201ENST00000440505 426 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 AL118558.3-201ENST00000607414 1079 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 INTS4P2-202ENST00000614726 2019 ntBASIC18.26■□□□□ 0.51
TRIM47Q96LD4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM47Q96LD4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms