Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 KRT18P13-201ENST00000400056 1290 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC015910.1-201ENST00000579400 975 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC025048.3-201ENST00000590609 569 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC005702.4-201ENST00000618393 416 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC099063.4-201ENST00000641099 1602 ntBASIC16.55■□□□□ 0.24
TRIM11Q96F44 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 WASH3P-207ENST00000560956 1394 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 AL133267.1-201ENST00000398220 340 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 RPL37AP1-201ENST00000412502 279 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 AL596442.2-201ENST00000610240 980 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.54■□□□□ 0.24
TRIM11Q96F44 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM11Q96F44 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM11Q96F44 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 MROH4P-201ENST00000431302 1578 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms