Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ZNF890P-202ENST00000530367 1156 ntBASIC15.91■□□□□ 0.14
RTP4Q96DX8 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 LINC01115-203ENST00000606068 577 ntBASIC15.91■□□□□ 0.14
RTP4Q96DX8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 AF228730.6-201ENST00000641497 218 ntBASIC15.91■□□□□ 0.14
RTP4Q96DX8 AC084121.3-201ENST00000641716 218 ntBASIC15.91■□□□□ 0.14
RTP4Q96DX8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ACE3P-201ENST00000423435 1973 ntBASIC15.91■□□□□ 0.14
RTP4Q96DX8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTP4Q96DX8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.91■□□□□ 0.14
RTP4Q96DX8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 REXO1L2P-201ENST00000425429 2069 ntBASIC15.9■□□□□ 0.14
RTP4Q96DX8 TSPY26P-202ENST00000565928 3884 ntBASIC15.9■□□□□ 0.14
RTP4Q96DX8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 AC007292.2-201ENST00000593524 1812 ntBASIC15.9■□□□□ 0.14
RTP4Q96DX8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 KRT18P43-201ENST00000469825 1281 ntBASIC15.9■□□□□ 0.14
RTP4Q96DX8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.9■□□□□ 0.14
RTP4Q96DX8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTP4Q96DX8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AP000845.1-201ENST00000581677 2131 ntBASIC15.89■□□□□ 0.13
RTP4Q96DX8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AL121723.1-201ENST00000445194 1519 ntBASIC15.89■□□□□ 0.13
RTP4Q96DX8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LINC02228-204ENST00000642115 2962 ntBASIC15.89■□□□□ 0.13
RTP4Q96DX8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 RN7SL618P-201ENST00000477850 296 ntBASIC15.89■□□□□ 0.13
RTP4Q96DX8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AC025181.2-201ENST00000606994 802 ntBASIC15.89■□□□□ 0.13
RTP4Q96DX8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTP4Q96DX8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.89■□□□□ 0.13
RTP4Q96DX8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms