Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 KRT18P13-201ENST00000400056 1290 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 MIR3687-2-201ENST00000577708 61 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 MIR3687-1-201ENST00000614492 61 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AC004877.2-201ENST00000623941 599 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AC018892.3-201ENST00000623986 2499 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 AL390755.1-201ENST00000623716 2027 ntBASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXRED1Q96CU9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC009090.5-201ENST00000624886 2285 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC025580.3-201ENST00000617932 1424 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC002056.1-201ENST00000395613 760 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 KRT18P2-201ENST00000447938 1258 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 KRT19P2-202ENST00000557173 1012 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 AC023511.2-201ENST00000618803 211 ntBASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXRED1Q96CU9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms