Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC092865.6-201ENST00000642101 219 ntBASIC15.09■□□□□ 0.01
VPS33AQ96AX1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 CYP4F24P-201ENST00000586049 1580 ntBASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS33AQ96AX1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 AJ011931.1-201ENST00000618749 2492 ntBASIC15.08■□□□□ 0.01
VPS33AQ96AX1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS33AQ96AX1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 AC142381.1-201ENST00000426099 345 ntBASIC15.08■□□□□ 0
VPS33AQ96AX1 AL645939.2-201ENST00000427340 991 ntBASIC15.08■□□□□ 0
VPS33AQ96AX1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.08■□□□□ 0
VPS33AQ96AX1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.08■□□□□ 0
VPS33AQ96AX1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.08■□□□□ 0
VPS33AQ96AX1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.08■□□□□ 0
VPS33AQ96AX1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.08■□□□□ 0
VPS33AQ96AX1 AL135744.1-201ENST00000565098 629 ntBASIC15.08■□□□□ 0
VPS33AQ96AX1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 KRT8P37-201ENST00000451609 1420 ntBASIC15.08■□□□□ 0
VPS33AQ96AX1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.08■□□□□ 0
VPS33AQ96AX1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.08■□□□□ 0
VPS33AQ96AX1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS33AQ96AX1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms