Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC136604.1-201ENST00000418535 575 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC026979.3-201ENST00000607315 403 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC105339.1-204ENST00000636249 355 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC232323.1-201ENST00000540724 2099 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 REXO1L5P-201ENST00000622260 2098 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 MROH4P-201ENST00000431302 1578 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTP4A1Q93096 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PTP4A1Q93096 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTP4A1Q93096 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTP4A1Q93096 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PTP4A1Q93096 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PTP4A1Q93096 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 KRT18P13-201ENST00000400056 1290 ntBASIC14.08□□□□□ -0.16
PTP4A1Q93096 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 AC211486.1-202ENST00000416371 468 ntBASIC14.08□□□□□ -0.16
PTP4A1Q93096 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 AL592309.1-201ENST00000443127 649 ntBASIC14.08□□□□□ -0.16
PTP4A1Q93096 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 AC211476.1-201ENST00000503899 468 ntBASIC14.08□□□□□ -0.16
PTP4A1Q93096 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.08□□□□□ -0.16
PTP4A1Q93096 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTP4A1Q93096 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 AC007191.1-201ENST00000623179 2995 ntBASIC14.07□□□□□ -0.16
PTP4A1Q93096 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms