Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AC068587.3-201ENST00000526613 355 ntBASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 AL513477.1-201ENST00000602865 2407 ntBASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6V0A1Q93050 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 AC127383.1-201ENST00000444697 1800 ntBASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 AC005229.1-201ENST00000392885 409 ntBASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 AP001889.1-201ENST00000525414 633 ntBASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 PRAL-201ENST00000624952 3286 ntBASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 AC093525.8-201ENST00000624099 1342 ntBASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6V0A1Q93050 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms