Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
ERCC4Q92889 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 OR2I1P-210ENST00000642037 4691 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC4Q92889 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC4Q92889 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ERCC4Q92889 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC4Q92889 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC4Q92889 AP000347.1-202ENST00000435868 847 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC4Q92889 ALG1L5P-201ENST00000482043 771 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 AC069335.1-201ENST00000489972 472 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 POLD2P1-201ENST00000511220 997 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 AC097359.3-201ENST00000603982 1210 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 AC026120.1-201ENST00000611536 926 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC4Q92889 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC4Q92889 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ERCC4Q92889 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERCC4Q92889 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
ERCC4Q92889 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 AC148477.4-201ENST00000613430 1793 ntBASIC17.79■□□□□ 0.44
ERCC4Q92889 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC4Q92889 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERCC4Q92889 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 AC026748.1-201ENST00000624349 3251 ntBASIC17.78■□□□□ 0.44
ERCC4Q92889 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC4Q92889 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 UXT-AS1-201ENST00000590504 1525 ntBASIC17.78■□□□□ 0.44
ERCC4Q92889 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ERCC4Q92889 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC4Q92889 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC4Q92889 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 PHKG1P2-201ENST00000457537 863 ntBASIC17.78■□□□□ 0.44
ERCC4Q92889 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.78■□□□□ 0.44
ERCC4Q92889 HNRNPUP1-201ENST00000554987 333 ntBASIC17.78■□□□□ 0.44
ERCC4Q92889 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ERCC4Q92889 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC4Q92889 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 AL607033.1-201ENST00000623900 1599 ntBASIC17.78■□□□□ 0.44
ERCC4Q92889 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC4Q92889 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC4Q92889 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms