Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AC092552.1-201ENST00000547243 906 ntBASIC14.08□□□□□ -0.16
PHF3Q92576 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.08□□□□□ -0.16
PHF3Q92576 MIR4259-201ENST00000584466 101 ntBASIC14.08□□□□□ -0.16
PHF3Q92576 AC133539.2-201ENST00000604757 467 ntBASIC14.08□□□□□ -0.16
PHF3Q92576 CU634019.7-201ENST00000624153 1185 ntBASIC14.08□□□□□ -0.16
PHF3Q92576 FP236241.2-201ENST00000624906 1185 ntBASIC14.08□□□□□ -0.16
PHF3Q92576 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PHF3Q92576 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
PHF3Q92576 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF3Q92576 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
PHF3Q92576 CSF2RBP1-201ENST00000447905 391 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.07□□□□□ -0.16
PHF3Q92576 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.07□□□□□ -0.16
PHF3Q92576 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.07□□□□□ -0.16
PHF3Q92576 PTP4A1P2-201ENST00000546033 454 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 HNRNPUP1-201ENST00000554987 333 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 INTS4P2-202ENST00000614726 2019 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 RPL13AP25-201ENST00000484130 612 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.07□□□□□ -0.16
PHF3Q92576 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.07□□□□□ -0.16
PHF3Q92576 MIR5189-201ENST00000577370 114 ntBASIC14.07□□□□□ -0.16
PHF3Q92576 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF3Q92576 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PHF3Q92576 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF3Q92576 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 AC092384.3-202ENST00000564646 2873 ntBASIC14.06□□□□□ -0.16
PHF3Q92576 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 AC112693.3-201ENST00000624819 1983 ntBASIC14.06□□□□□ -0.16
PHF3Q92576 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.06□□□□□ -0.16
PHF3Q92576 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PHF3Q92576 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PHF3Q92576 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.06□□□□□ -0.16
PHF3Q92576 AL355994.2-201ENST00000447882 704 ntBASIC14.06□□□□□ -0.16
PHF3Q92576 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.06□□□□□ -0.16
PHF3Q92576 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.06□□□□□ -0.16
PHF3Q92576 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.06□□□□□ -0.16
PHF3Q92576 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.06□□□□□ -0.16
PHF3Q92576 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.06□□□□□ -0.16
PHF3Q92576 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PHF3Q92576 AC124283.3-201ENST00000570869 594 ntBASIC14.06□□□□□ -0.16
PHF3Q92576 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.06□□□□□ -0.16
PHF3Q92576 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
PHF3Q92576 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.06□□□□□ -0.16
PHF3Q92576 AL512343.1-201ENST00000605837 169 ntBASIC14.06□□□□□ -0.16
PHF3Q92576 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms