Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AC011467.4-201ENST00000594891 528 ntBASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 AL671883.3-201ENST00000603274 991 ntBASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 GHSR-202ENST00000427970 912 ntBASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC44A1Q8WWI5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 AC069335.1-201ENST00000489972 472 ntBASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms