Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.4□□□□□ -0.26
SMIM4Q8WVI0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
SMIM4Q8WVI0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.4□□□□□ -0.27
SMIM4Q8WVI0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SMIM4Q8WVI0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.4□□□□□ -0.27
SMIM4Q8WVI0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC107918.4-201ENST00000641966 3141 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CICP17-201ENST00000418553 2377 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC004987.2-201ENST00000395959 1148 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AL732292.2-201ENST00000609649 430 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC018529.2-202ENST00000611482 3087 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 AC015802.1-201ENST00000588104 1449 ntBASIC13.39□□□□□ -0.27
SMIM4Q8WVI0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CICP11-201ENST00000434745 2827 ntBASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms